GPL-3.0-only licensed by Christian Hoener zu Siederdissen, Florian Eggenhofer
Maintained by [email protected]
This version can be pinned in stack with:BiobaseBlast-0.3.3.0@sha256:5eecec73254012d17fe0d515fd91a01d122184f15afc3d0685ed0c04ad0b7b2d,6896

BiobaseBlast Hackage github action: CI

This library contains BLAST-related functionality.

Contact

Christian Hoener zu Siederdissen
Leipzig University, Leipzig, Germany
[email protected]
http://www.bioinf.uni-leipzig.de/~choener/

Changes

0.3.3.0

  • Compatibility with GHC 9
  • Switched testing to github actions

0.3.1.0

  • Blast datatype supports optional taxonomy id

0.3.0.1

  • Fix for newly ambigous ? operator export from attoparsec and aeson>=1.4.4.0 in Import module

0.3.0.0

  • generalized IO-based functions to MonadIO. This should be non-breaking in most cases.
  • Added parsing functionality for JSON2 NCBI BLAST+ output
  • currently tags all DNA/AA letters with ()

0.2.0.0

  • Added parsing functionality for tabular NCBI BLAST+ output

0.1.0.0

  • more efficient tables (using PrimitiveArray)
  • updated to newest PrimitiveArray & BiobaseXNA
  • travis.yml added

0.0.0.1

  • initial commit