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GPL-3.0-only licensed by Christian Hoener zu Siederdissen
Provides importers for FR3D resource files. Of particular
interest are basepairs files which describe canonical and
non-canonical (non-Watson-Crick) base pairings in RNA secondary
structure.
The original FR3D paper is:
FR3D: Finding Local and Composite Recurrent Structural Motifs
in RNA 3D Structures, Michael Sarver; Craig L. Zirbel; Jesse
Stombaugh; Ali Mokdad; Neocles B. Leontis. /Journal of
Mathematical Biology/ (2008) 56:215–252.
Changes since any 0.1.*:
Zero-based indexing (FR3D is one-based!) for sequence
positions. We do not change the nucleotide PDB number.
Some sanity checks, a number of FR3D files fall through at
this and need to be checked for consistency